vg
tools for working with variation graphs
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vg::SourceSinkOverlay Member List

This is the complete list of members for vg::SourceSinkOverlay, including all inherited members.

backingvg::SourceSinkOverlayprotected
backing_headsvg::SourceSinkOverlayprotected
backing_tailsvg::SourceSinkOverlayprotected
flip(const handle_t &handle) constvg::SourceSinkOverlayvirtual
follow_edges_impl(const handle_t &handle, bool go_left, const function< bool(const handle_t &)> &iteratee) constvg::SourceSinkOverlayvirtual
for_each_handle_impl(const function< bool(const handle_t &)> &iteratee, bool parallel=false) constvg::SourceSinkOverlayvirtual
from_backing(const handle_t &backing_handle) constvg::SourceSinkOverlayinlineprotected
get_degree(const handle_t &handle, bool go_left) constvg::SourceSinkOverlayvirtual
get_handle(const id_t &node_id, bool is_reverse) constvg::SourceSinkOverlayvirtual
get_id(const handle_t &handle) constvg::SourceSinkOverlayvirtual
get_is_reverse(const handle_t &handle) constvg::SourceSinkOverlayvirtual
get_length(const handle_t &handle) constvg::SourceSinkOverlayvirtual
get_node_count() constvg::SourceSinkOverlayvirtual
get_sequence(const handle_t &handle) constvg::SourceSinkOverlayvirtual
get_sink_handle() constvg::SourceSinkOverlay
get_source_handle() constvg::SourceSinkOverlay
get_underlying_handle(const handle_t &handle) constvg::SourceSinkOverlayvirtual
has_node(id_t node_id) constvg::SourceSinkOverlayvirtual
is_ours(const handle_t &our_handle) constvg::SourceSinkOverlayinlineprotected
max_node_id() constvg::SourceSinkOverlayvirtual
min_node_id() constvg::SourceSinkOverlayvirtual
node_lengthvg::SourceSinkOverlayprotected
sink_fwdvg::SourceSinkOverlayprotected
sink_idvg::SourceSinkOverlayprotected
sink_revvg::SourceSinkOverlayprotected
source_fwdvg::SourceSinkOverlayprotected
source_idvg::SourceSinkOverlayprotected
source_revvg::SourceSinkOverlayprotected
SourceSinkOverlay(const HandleGraph *backing, size_t length=1024, id_t source_id=0, id_t sink_id=0, bool break_disconnected=true)vg::SourceSinkOverlay
to_backing(const handle_t &our_handle) constvg::SourceSinkOverlayinlineprotected